Short answer · Medically reviewed summary · Last updated: 2026-05-08

Coffin-Siris Syndrome (CSS) is primarily classified under ICD-10 code Q87.89 (Other specified congenital malformation syndromes, not elsewhere classified) and does not have a unique, dedicated ICD-9 code, historically falling under 759.89 (Other specified congenital anomalies). Because Coffin-Siris Syndrome is a rare genetic disorder, it often requires the use of these broader "catch-all" codes for insurance and medical record documentation. What is the clinical significance of Coffin-Siris Syndrome? Coffin-Siris Syndrome is a rare genetic condition characterized by developmental delay, intellectual disability, and distinctive physical features, most notably hypoplasia or aplasia of the fifth digit nail or phalanx.

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ICD10 code of Coffin Siris Syndrome and ICD9 code

ICD-10 and ICD-9 codes for Coffin Siris Syndrome, with classification details for clinicians, coders and patients.

ICD9 and ICD10 codes of Coffin Siris Syndrome

Coffin-Siris Syndrome (CSS) is primarily classified under ICD-10 code Q87.89 (Other specified congenital malformation syndromes, not elsewhere classified) and does not have a unique, dedicated ICD-9 code, historically falling under 759.89 (Other specified congenital anomalies). Because Coffin-Siris Syndrome is a rare genetic disorder, it often requires the use of these broader "catch-all" codes for insurance and medical record documentation.



What is the clinical significance of Coffin-Siris Syndrome?


Coffin-Siris Syndrome is a rare genetic condition characterized by developmental delay, intellectual disability, and distinctive physical features, most notably hypoplasia or aplasia of the fifth digit nail or phalanx. Currently, 212 people with Coffin-Siris Syndrome have joined the DiseaseMaps.org community to share their experiences, highlighting the diverse clinical presentation of the disorder.



How is Coffin-Siris Syndrome diagnosed?


Diagnosis of Coffin-Siris Syndrome is typically confirmed through molecular genetic testing. Since the discovery that Coffin-Siris Syndrome is often caused by mutations in genes involved in the BAF chromatin remodeling complex (such as ARID1A, ARID1B, SMARCA4, and SMARCE1), clinical geneticists use gene panels or whole-exome sequencing to identify the underlying cause.



What are the common features of Coffin-Siris Syndrome?


The clinical manifestations of Coffin-Siris Syndrome are broad and vary significantly between individuals. Key features often observed by clinicians include:



  • Hypoplasia or absence of the fifth fingernail and/or distal phalanx.

  • Characteristic coarse facial features, including a wide mouth and thick eyebrows.

  • Mild to severe intellectual disability or developmental delay.

  • Feeding difficulties and recurrent respiratory infections in infancy.

  • Hypertrichosis (excessive hair growth) or sparse scalp hair.



Is Coffin-Siris Syndrome hereditary?


Most cases of Coffin-Siris Syndrome occur as a *de novo* (sporadic) mutation, meaning the genetic change is not inherited from either parent. However, rare instances of familial transmission have been reported, making genetic counseling essential for families navigating a Coffin-Siris Syndrome diagnosis.



Next steps



  • Consult with a clinical geneticist to discuss molecular testing and family planning.

  • Connect with the Coffin-Siris Syndrome community at DiseaseMaps.org to share insights with others.

  • Schedule multidisciplinary evaluations, including neurology, cardiology, and speech therapy, to manage the multisystem nature of the syndrome.



Medical disclaimer: This information is for educational purposes only and should not replace professional medical advice, diagnosis, or treatment.



References



  • NIH Genetic and Rare Diseases Information Center (GARD): Coffin-Siris Syndrome.

  • Orphanet: Coffin-Siris Syndrome (ORPHA:1879).

  • OMIM (Online Mendelian Inheritance in Man): Entry #135900.

  • Coffin-Siris Syndrome Foundation: Patient resources and support.

Author: DiseaseMaps Editorial Team
Reviewed against authoritative medical sources (NIH GARD, Orphanet, OMIM)
Last updated: 2026-05-08
Medical disclaimer: This information does not substitute professional medical advice. Always consult your doctor before making health decisions.
Source: DiseaseMaps.org
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ICD9 and ICD10 codes of Coffin Siris Syndrome

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Stories of Coffin Siris Syndrome

COFFIN SIRIS SYNDROME STORIES
Coffin Siris Syndrome stories
My 6 year old son has just been diagnosed with Coffin Sirus syndrome after a looooong journey of getting to the bottom of his diagnosis. Finally we have an answer. I am his mother.
Coffin Siris Syndrome stories
Declan was diagnosed with CSS in 2018. He also has a diagnosis of ADHD. Early in his life we were told that he may never walk/talk or be independent. He is now (nearly) 10. He goes to a regular school in a special needs class but also spends a lot o...
Coffin Siris Syndrome stories
My name is Naomi, I am 20 years old and I have coffin-siris syndrome. My affected gene is smarca4 but there are 10 known genes that can be affected to cause css. I am part of a Facebook group with over 1000 members so please come find us for help and...
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Alice was always a little slower at developing, mainly with speech. After a genetic test the results were given Dec 2019. She mainly suffers from non-verbal, she is now 6.5yrs (Jan 2021) and although she is very expensive and makes similar sounds t...
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Leo our son who is 2 years old got his diagnosis at the beginning of August 2019. He has arid 1b coffin Siris

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