Short answer · Medically reviewed summary · Last updated: 2026-04-06

Hashimoto’s disease is an autoimmune condition caused by a combination of genetic predisposition and environmental triggers that lead the immune system to mistakenly attack the thyroid gland. The Pathophysiology of Hashimoto’s In Hashimoto’s disease, the body’s immune system—which is designed to fight off viruses and bacteria—loses its ability to distinguish between foreign invaders and the healthy cells of the thyroid. Think of it as a case of mistaken identity: immune cells, specifically T-cells and B-cells, infiltrate the thyroid gland and produce antibodies (such as anti-thyroid peroxidase) that gradually destroy thyroid tissue.

3 people with Hashimotos Disease have shared their first-person experience on this question at DiseaseMaps.

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Which are the causes of Hashimotos Disease?

Causes of Hashimotos Disease explained: genetic and environmental factors, reviewed against medical sources, plus patient perspectives.

Hashimotos Disease causes

Hashimoto’s disease is an autoimmune condition caused by a combination of genetic predisposition and environmental triggers that lead the immune system to mistakenly attack the thyroid gland.



The Pathophysiology of Hashimoto’s


In Hashimoto’s disease, the body’s immune system—which is designed to fight off viruses and bacteria—loses its ability to distinguish between foreign invaders and the healthy cells of the thyroid. Think of it as a case of mistaken identity: immune cells, specifically T-cells and B-cells, infiltrate the thyroid gland and produce antibodies (such as anti-thyroid peroxidase) that gradually destroy thyroid tissue. This destruction reduces the gland’s ability to produce hormones, eventually leading to hypothyroidism.



Genetic and Environmental Factors


While there is no single "Hashimoto’s disease gene," clinical research suggests a strong polygenic component. Certain variations in human leukocyte antigen (HLA) genes, which help the immune system identify foreign proteins, increase an individual's susceptibility. However, genetics alone do not guarantee the development of the condition; environmental factors are almost always necessary to "flip the switch." These triggers may include high iodine intake, viral infections, extreme stress, or exposure to certain medications that disrupt immune homeostasis.



Current Research and Distinctions


It is vital to distinguish between a cause and a risk factor. A cause is the direct mechanism of immune destruction, while a risk factor—such as being female or having a family history of autoimmune disorders—simply increases the likelihood of Hashimoto’s disease manifesting. Currently, the medical community is intensely researching the role of the gut microbiome and epigenetic modifications in the etiology of Hashimoto’s disease. Scientists are exploring how our internal environment interacts with our DNA to trigger this chronic inflammation.



While we understand the autoimmune nature of the condition, the exact "why" behind the initial immune misfire remains a subject of ongoing study. Research continues to evolve, aiming to identify preventative strategies for those at high risk.



Medical Disclaimer: This information is for educational purposes only and does not constitute medical advice, diagnosis, or treatment. Always seek the advice of your physician or other qualified health provider with any questions regarding a medical condition.



References



  • NIH Genetic and Rare Diseases Information Center (GARD): Hashimoto Thyroiditis

  • Orphanet: Hashimoto Thyroiditis

  • National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK): Hashimoto’s Disease

Author: DiseaseMaps Editorial Team
Reviewed against authoritative medical sources (NIH GARD, Orphanet, OMIM)
Last updated: 2026-04-06
Sources cited: NIH Genetic and Rare Diseases Information Center (GARD): Hashimoto Thyroiditis · Orphanet: Hashimoto Thyroiditis · National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK): Hashimoto’s Disease
Medical disclaimer: This information does not substitute professional medical advice. Always consult your doctor before making health decisions.
Source: DiseaseMaps.org
4 answers
They are still trying to figure out the official cause of the start of the autoimmune attack. Some very prominent autoimmunity researchers believe that there is a genetic component, enviromental triggers, and food sensitivity/allergy that cause damage to the GI system that bring about an in essence "perfect storm" that starts the attack on the thyroid tissue.

Posted Oct 1, 2017 by Carolina_Tia 2050
Translated from french Improve translation
Today, no study satisfactorily does not seem to be able to determine what are the cause of this disease. Perhaps it is that we are many and many we manifest so that we look seriously at the subject and that a thorough study be made. Some think it may come from a bacterium that causes chronic inflammation, which will wake up a little too much of our white blood cells that for who knows what reason would be to attack our thyroid we do not know what element triggers a crisis it is for this reason that it is preferable to maintain a natural diet rather than industrial.It would be necessary that extensive research can be done on the subject.

Posted Sep 9, 2017 by Amelie 1000
Translated from portuguese Improve translation
The disease is autoimmune, there is not a specific cause, but the cases tend to be common in people of the same family.

Posted Oct 23, 2017 by Maria 2000

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I have been having a variety of health problems since I was 17. It started out with back pain. Then at the end of 2008, when I was 18, I was in a car accident and my back pain got worse. On top of that, I started to have pain in my hips, shoulders an...
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Although I wasn't diagnosed until 2014, my symptoms indicate I've had Thyroid autoimmune disease for more than 20 years. I'm struggling to find a good MD in Chicagoland who specializes in thyroid autoimmune treatment with a holistic approach.  Drugs...
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It's a family affair; most of the women on my mothers side of the family have it. My grandmother (my mothers mother) had Hashimoto and underwent an operation to have her thyroid removed. My mother has been upp and down (hyper to hypo) but I don't kno...
Hashimotos Disease stories
I am a 65-year-old-woman who has been sick for a very, very long time. I was struglling with severe bacterial skin infections, extreme exhaustion and fatique and lack of energy. My Hasimotos' Throiditus was triggered by mold in the workplace. After t...
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In the early'90s I was experiencing psychological issues like depression and anxiety. Around 2002 I was diagnosed with Bipolar Disorder. In 2010 I was tested and diagnosed with Hashimoto's, which may have been the disease that bought on my bipolar di...

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my doctor only orders TSH and my last lab was .098 ( range 0.04 - 4). i am still having sx such as low energy, weight gain, moody. i take Synthroid 75 mcg and Cytomel 10 twice a day. not sure if not converting and pooling are the hey same thing but h...

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